Computational Methods in Genome Assembly and Annotation
PDF

Keywords

Genome Assembly
Genome Annotation
Computational Methods
Bioinformatics
De Novo Assembly
Reference-Based Assembly
Functional Annotation
Sequencing Technologies

Abstract

Genome assembly and annotation are fundamental steps in understanding the genetic makeup of organisms. With the advent of high-throughput sequencing technologies, computational methods have become essential for assembling and annotating genomes accurately and efficiently. This article reviews the key computational approaches used in genome assembly and annotation, including de novo and reference-based assembly techniques, as well as functional annotation methods. We also discuss the challenges in these processes, such as dealing with complex genomes and incomplete data, and highlight the future directions in genome analysis.

PDF

All articles published in the American Journal of Bioinformatics (AJB) are licensed under the Creative Commons Attribution 4.0 International License (CC BY 4.0). Under this license, authors retain full copyright of their work and grant permission to anyone to:

  • Share — copy and redistribute the material in any medium or format

  • Adapt — remix, transform, and build upon the material for any purpose, even commercially

Conditions:

  • Attribution: Appropriate credit must be given to the original author(s) and the source, a link to the license must be provided, and any changes made must be indicated.

  • No additional restrictions: You may not apply legal terms or technological measures that legally restrict others from doing anything the license permits.

This open-access license ensures that scholarly work published in AJB is freely accessible and usable, promoting knowledge dissemination and academic collaboration worldw